Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019662.1 Corchorus olitorius cultivar O-4 contig19695, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38292

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
101--245
71
2.0
71
97
0
272
26
17
26
30
1.97
3938--4108
87
2.0
87
92
2
290
35
13
18
33
1.89
3962--4140
87
2.0
88
80
5
202
41
11
16
30
1.84
5113--5142
2
15.0
2
92
0
51
50
3
0
46
1.18
11357--11389
2
16.5
2
100
0
66
51
0
0
48
1.00
11750--11790
2
21.0
2
90
5
57
53
0
0
46
1.00
26044--26077
2
17.0
2
100
0
68
50
0
0
50
1.00
26599--26629
2
15.5
2
100
0
62
51
0
0
48
1.00
35745--35769
6
4.2
6
100
0
50
36
0
32
32
1.58
36903--36927
7
3.6
7
100
0
50
88
0
12
0
0.53

Tables:   1

The End!