Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019671.1 Corchorus olitorius cultivar O-4 contig19704, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34291

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7075--7104
2
15.0
2
100
0
60
50
0
0
50
1.00
12157--12200
18
2.6
17
82
10
54
4
20
2
72
1.13
12814--12879
33
2.0
33
100
0
132
30
9
15
45
1.77
26005--26029
10
2.5
10
100
0
50
16
0
0
84
0.63
26347--26418
36
2.0
36
100
0
144
30
19
22
27
1.98
27874--28211
178
1.9
178
84
4
459
35
16
14
34
1.89
27874--28256
178
2.2
178
81
4
452
36
15
14
33
1.89

Tables:   1

The End!