Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019684.1 Corchorus olitorius cultivar O-4 contig19717, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30698

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
133--170
11
3.5
11
85
10
51
57
2
0
39
1.12
14751--14816
30
2.2
30
94
0
114
45
3
24
27
1.68
17343--17382
20
2.0
20
85
4
55
45
5
12
37
1.64
28631--28719
30
2.9
30
86
3
106
39
13
16
30
1.87
28628--28719
31
3.0
31
85
3
114
38
13
18
30
1.89
30200--30240
20
2.0
20
95
0
73
24
36
21
17
1.94
30663--30693
1
31.0
1
93
0
53
0
0
0
96
0.05

Tables:   1

The End!