Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019694.1 Corchorus olitorius cultivar O-4 contig19727, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17163

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1985--2038
9
6.1
9
77
12
58
48
0
1
50
1.11
3969--4014
24
1.9
24
95
0
83
47
17
10
23
1.79
6786--6827
18
2.3
18
84
8
59
4
23
21
50
1.68
6760--6951
47
4.1
47
82
8
230
5
25
19
49
1.70
6879--6923
18
2.4
19
82
14
58
4
28
20
46
1.69
11307--11333
13
2.1
13
100
0
54
22
22
22
33
1.97
13274--13304
16
1.9
16
93
0
53
29
29
12
29
1.94
14268--14312
23
2.0
23
86
8
65
31
20
15
33
1.93
15952--17058
322
3.4
318
79
8
1033
35
16
13
34
1.88

Tables:   1

The End!