Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019695.1 Corchorus olitorius cultivar O-4 contig19728, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19317

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8--2339
332
7.1
329
71
13
1028
36
16
13
33
1.89
1041--2450
322
4.4
318
79
8
1165
36
17
13
32
1.89
2446--2485
11
3.5
11
86
6
53
27
20
2
50
1.61
2965--5170
332
6.7
328
79
7
2097
36
15
14
32
1.89
11559--11674
25
4.6
25
90
0
169
22
19
28
29
1.98
14445--17307
327
8.7
326
76
9
2374
37
15
13
33
1.87
17675--17720
13
3.4
14
80
17
53
47
4
6
41
1.49
18748--18774
5
5.4
5
100
0
54
18
0
0
81
0.69
19276--19314
2
19.0
2
94
5
69
48
2
0
48
1.15

Tables:   1

The End!