Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019697.1 Corchorus olitorius cultivar O-4 contig19730, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46673

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1086--1146
31
2.0
31
81
12
72
62
9
6
21
1.49
6582--6633
23
2.4
22
72
18
54
38
5
15
40
1.71
15659--15764
56
1.9
54
96
3
194
42
6
3
47
1.47
22084--22216
60
2.2
60
95
0
239
34
18
18
28
1.95
22115--22245
29
4.4
29
80
11
167
33
18
18
29
1.95
22115--22278
89
1.8
89
96
2
303
34
18
18
28
1.95
22318--22482
31
5.5
29
70
13
120
28
20
17
33
1.95
22313--22478
60
2.8
60
88
5
255
28
19
17
34
1.95
22346--22447
29
3.5
28
69
15
89
30
19
17
32
1.95
28566--28792
122
1.8
126
88
5
354
16
18
19
44
1.87
33758--33808
24
2.1
24
88
0
75
11
25
11
50
1.72

Tables:   1

The End!