Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019699.1 Corchorus olitorius cultivar O-4 contig19732, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25292

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35--119
38
2.2
40
87
4
120
11
37
41
9
1.74
7608--7656
9
4.9
10
85
12
57
20
0
0
79
0.73
7610--7641
9
3.6
9
100
0
64
18
0
0
81
0.70
13940--14009
36
1.9
36
91
0
113
21
10
8
60
1.55
14528--14936
201
2.0
203
94
2
727
44
8
11
36
1.70
15045--15125
39
2.0
40
85
2
110
34
4
11
49
1.60
15183--15390
103
2.0
103
98
0
398
44
8
6
40
1.60
15773--15811
20
1.9
21
84
5
53
38
2
17
41
1.64
24548--24628
39
2.0
40
92
2
137
50
8
3
37
1.51
24709--25119
203
2.0
203
94
2
720
37
10
8
44
1.69

Tables:   1

The End!