Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019701.1 Corchorus olitorius cultivar O-4 contig19734, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44880

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
194--646
232
2.0
231
92
0
753
37
13
13
35
1.84
409--1870
334
4.4
334
87
3
2124
35
15
15
33
1.89
6805--6902
51
1.9
51
95
0
178
45
15
8
30
1.75
16591--16625
16
2.2
16
100
0
70
22
25
0
51
1.48
19997--22889
330
8.7
328
78
7
2503
33
14
15
36
1.88
23121--23158
19
2.0
19
100
0
76
47
10
0
42
1.38
27125--27150
11
2.4
11
100
0
52
0
0
7
92
0.39
34199--34252
26
2.1
26
100
0
108
29
18
27
24
1.98
44282--44333
20
2.6
20
87
0
68
36
17
17
28
1.92
44334--44367
17
2.0
17
88
0
50
50
14
11
23
1.76

Tables:   1

The End!