Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019702.1 Corchorus olitorius cultivar O-4 contig19735, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47981

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8729--8807
30
2.6
31
83
2
97
16
22
25
35
1.95
13451--13487
1
37.0
1
94
0
56
0
5
0
94
0.30
16673--16780
53
2.0
54
89
1
164
28
11
18
41
1.85
26763--26796
17
2.0
17
100
0
68
47
11
23
17
1.81
35656--35695
19
2.1
19
100
0
80
37
10
35
17
1.83
44455--44760
154
2.0
154
87
2
445
29
15
14
41
1.85
44611--46041
327
4.5
325
74
12
1184
35
15
13
34
1.87
45806--46326
288
1.8
280
86
4
753
38
16
12
33
1.86
47951--47980
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!