Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019706.1 Corchorus olitorius cultivar O-4 contig19739, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83953

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13003--13289
135
2.1
135
82
5
348
25
21
21
32
1.98
13721--13758
18
2.1
18
95
0
67
78
2
18
0
0.86
28419--28449
2
15.5
2
100
0
62
51
0
0
48
1.00
49667--49720
28
2.0
28
92
3
92
12
14
24
48
1.79
49660--49720
28
2.3
26
86
8
88
11
18
21
49
1.78
66525--67399
387
2.3
387
91
2
1411
32
14
27
25
1.94
67696--67733
6
6.3
6
93
0
67
15
65
0
18
1.27
76435--76503
33
2.1
33
89
5
104
23
5
11
59
1.53
76503--76551
23
2.1
23
100
0
98
18
8
10
63
1.50
80113--80161
21
2.4
21
96
3
91
32
4
6
57
1.42

Tables:   1

The End!