Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019708.1 Corchorus olitorius cultivar O-4 contig19741, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10659

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4445--4473
15
2.0
15
93
6
51
0
0
37
62
0.96
5052--5102
26
2.0
26
88
0
75
17
39
5
37
1.74
5433--5495
30
2.1
30
84
3
81
30
15
22
31
1.95
5655--5687
16
2.2
15
89
10
50
0
15
0
84
0.61
7912--8021
39
2.8
39
98
1
211
32
20
7
40
1.80
8002--8031
10
3.0
10
100
0
60
30
20
10
40
1.85
7956--8126
50
3.3
50
81
12
161
33
19
9
36
1.85
8029--8138
55
2.0
55
98
0
211
37
20
11
30
1.88
8037--8128
19
4.9
19
69
15
66
35
18
11
33
1.88

Tables:   1

The End!