Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019710.1 Corchorus olitorius cultivar O-4 contig19743, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12921

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
214--1156
332
2.8
331
86
5
1212
34
16
15
33
1.90
1831--3072
332
3.7
332
85
3
1515
34
17
14
34
1.90
5204--5424
63
3.5
62
95
3
399
38
21
37
3
1.69
5391--5485
34
2.8
34
95
0
172
47
18
30
3
1.65
5576--5600
2
12.5
2
100
0
50
52
48
0
0
1.00
6334--6441
45
2.4
45
87
1
137
36
16
25
22
1.94
6357--6457
45
2.2
45
96
0
184
29
21
23
24
1.99
10575--10621
25
1.9
25
83
12
62
61
0
34
4
1.15

Tables:   1

The End!