Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019715.1 Corchorus olitorius cultivar O-4 contig19748, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6540

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--4555
334
13.2
333
73
11
2604
34
17
16
31
1.92
1--1670
666
2.5
667
87
1
2413
35
17
15
31
1.91
1636--1703
33
2.1
33
94
0
118
30
32
25
11
1.91
2070--4555
334
7.5
332
86
2
3020
35
16
16
31
1.92
4369--4722
191
1.9
191
92
0
600
33
18
22
25
1.96
4041--5069
514
2.0
517
85
4
1376
35
17
18
29
1.94
4563--5377
332
2.5
323
83
5
1028
36
17
16
29
1.92

Tables:   1

The End!