Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019721.1 Corchorus olitorius cultivar O-4 contig19754, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33276

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--34
2
17.0
2
100
0
68
50
0
0
50
1.00
1731--1947
107
2.0
107
91
0
353
41
7
7
42
1.63
5796--6043
116
2.1
118
80
6
272
38
11
18
31
1.87
6731--6762
14
2.3
14
100
0
64
46
12
0
40
1.42
9362--9419
21
2.9
19
84
5
71
31
22
12
34
1.91
9366--9419
19
2.7
20
82
5
65
29
24
12
33
1.92
11900--11930
2
15.5
2
100
0
62
51
0
0
48
1.00
13076--13114
2
19.5
2
100
0
78
51
0
0
48
1.00
13685--13738
26
2.1
26
85
0
72
16
11
22
50
1.77
13726--13780
27
2.1
27
93
3
94
40
0
12
47
1.42
30898--30932
18
1.9
18
94
0
61
0
51
5
42
1.25

Tables:   1

The End!