Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019732.1 Corchorus olitorius cultivar O-4 contig19765, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17040

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--36
2
18.0
2
100
0
72
50
0
0
50
1.00
6447--6540
33
3.0
33
79
17
128
21
52
3
23
1.61
6447--6535
27
3.1
27
87
9
106
20
51
3
24
1.62
13601--13641
6
7.3
6
81
15
52
34
12
0
53
1.38
16693--16811
60
2.0
60
80
6
134
36
15
21
27
1.93
16836--16993
31
5.2
30
66
17
103
27
20
19
32
1.97
16842--16993
60
2.5
60
92
0
250
27
21
19
32
1.97

Tables:   1

The End!