Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019735.1 Corchorus olitorius cultivar O-4 contig19768, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34036

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7443--7478
18
2.0
18
100
0
72
33
5
11
50
1.61
7950--8013
32
2.0
32
93
0
110
26
26
15
31
1.96
8954--9009
29
1.9
29
82
7
69
37
5
5
51
1.47
27300--27333
10
3.3
10
84
8
50
76
0
17
5
0.98
30001--30031
15
2.1
15
100
0
62
12
29
0
58
1.35
30272--30406
31
4.4
31
87
0
171
18
24
25
31
1.97
30822--30884
30
2.1
30
87
3
90
25
12
9
52
1.69
32860--32892
2
16.5
2
100
0
66
48
0
0
51
1.00
33029--33175
60
2.4
62
90
3
237
34
12
4
48
1.60
33029--33120
30
3.1
29
65
22
73
33
14
4
47
1.63
33029--33213
60
3.0
62
81
13
206
33
11
3
50
1.57
33846--33947
43
2.3
44
83
8
120
37
10
12
39
1.79
34006--34035
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!