Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019739.1 Corchorus olitorius cultivar O-4 contig19772, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35764

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60--110
22
2.3
22
90
6
77
43
19
3
33
1.70
156--238
22
3.8
21
72
20
64
27
24
7
40
1.81
298--451
22
7.0
22
70
10
91
33
11
12
42
1.80
269--434
44
3.8
44
76
7
124
36
12
11
39
1.79
19719--19752
15
2.2
16
89
5
52
79
0
20
0
0.73
19724--19752
11
2.7
11
94
5
51
82
0
17
0
0.66
26144--26186
20
2.2
20
83
8
52
69
6
4
18
1.29
26763--26798
18
2.0
18
88
0
54
5
16
5
72
1.23
35014--35054
21
1.9
22
85
5
57
46
29
14
9
1.77

Tables:   1

The End!