Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019742.1 Corchorus olitorius cultivar O-4 contig19775, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25080

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1003--1115
58
1.9
58
90
0
181
32
20
13
33
1.91
4881--4924
22
2.0
22
81
0
52
43
2
4
50
1.35
10393--10420
13
2.2
13
100
0
56
32
14
14
39
1.86
19260--19306
19
2.3
21
82
7
53
63
10
4
21
1.43
21183--21290
55
1.9
56
88
1
164
46
13
19
20
1.84
24990--25055
2
33.5
2
75
14
57
42
3
6
48
1.43
24990--25053
24
2.7
24
86
11
80
42
3
6
48
1.44

Tables:   1

The End!