Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019744.1 Corchorus olitorius cultivar O-4 contig19777, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24808

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5121--5183
33
1.9
33
96
0
117
44
12
22
20
1.85
16104--16168
30
2.2
30
86
5
87
43
6
1
49
1.37
16807--16863
28
2.0
28
100
0
114
40
7
14
38
1.73
19856--19958
52
2.0
52
92
0
170
42
9
16
31
1.80
22669--22729
22
2.8
22
84
0
77
39
11
9
39
1.75
23256--23280
5
5.0
5
100
0
50
20
0
0
80
0.72
23633--23670
17
2.4
17
87
12
55
7
13
39
39
1.73
24659--24766
32
3.4
31
72
16
87
53
6
3
36
1.44

Tables:   1

The End!