Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019754.1 Corchorus olitorius cultivar O-4 contig19787, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35996

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4245--4293
17
2.9
17
96
0
89
18
24
22
34
1.96
4245--4309
34
1.9
34
84
6
87
21
21
21
35
1.96
25070--25108
19
2.1
19
95
0
69
20
33
10
35
1.86
25537--25594
19
2.9
21
79
10
75
31
22
10
36
1.88
25924--25955
15
2.1
15
94
0
55
59
12
9
18
1.59
29483--29551
36
1.9
36
93
0
120
28
7
14
49
1.70
33172--33347
80
2.1
82
92
7
293
28
13
25
32
1.94
34063--34098
17
2.1
17
89
0
54
19
25
11
44
1.83
34351--34407
28
2.0
29
96
3
107
49
10
19
21
1.78

Tables:   1

The End!