Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019756.1 Corchorus olitorius cultivar O-4 contig19789, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18774

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2126--2183
28
2.1
28
96
0
107
32
17
24
25
1.96
2093--2192
23
4.2
23
65
16
60
30
16
28
26
1.96
2634--2726
47
1.9
49
84
6
127
24
11
11
51
1.72
4822--4860
20
2.0
20
89
0
60
33
41
0
25
1.56
4879--4921
20
2.2
20
95
0
77
27
48
0
23
1.51
4818--4931
57
2.0
57
94
0
201
28
42
4
25
1.74
6256--6343
45
2.0
44
85
10
119
43
20
3
32
1.69
11595--11627
15
2.2
15
94
0
57
18
24
18
39
1.92
17050--17085
2
18.0
2
100
0
72
50
0
0
50
1.00

Tables:   1

The End!