Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019760.1 Corchorus olitorius cultivar O-4 contig19793, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7052

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
380--433
24
2.3
24
84
12
76
33
16
0
50
1.46
394--441
24
2.0
24
100
0
96
33
20
0
45
1.52
1715--1896
96
1.9
96
91
2
303
34
13
15
35
1.88
2846--2910
18
3.6
18
91
0
103
32
27
10
29
1.90
4055--4096
21
2.0
21
100
0
84
33
4
19
42
1.72
5116--5145
15
2.0
15
93
0
51
60
6
10
23
1.52
5136--5187
21
2.5
21
90
0
86
55
9
23
11
1.64

Tables:   1

The End!