Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019762.1 Corchorus olitorius cultivar O-4 contig19795, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25616

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2735--3020
29
9.0
29
82
16
329
27
3
6
61
1.39
2868--2894
13
2.1
13
100
0
54
22
7
7
62
1.46
2910--2973
21
3.3
21
72
28
77
28
3
6
62
1.34
2800--3066
139
1.9
138
81
8
310
28
6
7
57
1.51
8625--8930
22
14.1
22
72
11
141
35
16
9
38
1.81
8454--8930
44
10.9
43
71
11
272
35
16
10
37
1.83
9119--9222
21
4.8
22
75
12
83
35
9
9
45
1.70
9167--9245
21
3.5
22
79
10
72
37
10
8
43
1.70
9227--9268
22
2.0
22
85
4
59
30
23
11
33
1.91
9630--10694
539
2.0
526
88
3
1578
34
14
17
32
1.91
20289--20374
24
3.6
24
96
0
163
12
1
24
61
1.38
20473--20512
13
3.3
13
80
20
59
15
0
35
50
1.44
20465--20512
23
2.1
23
96
0
87
14
0
35
50
1.44

Tables:   1

The End!