Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019764.1 Corchorus olitorius cultivar O-4 contig19797, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42939

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
537--564
3
9.3
3
100
0
56
67
0
0
32
0.91
28118--28211
45
2.2
44
86
7
140
37
21
6
35
1.79
30482--30577
45
2.2
44
90
3
149
36
22
4
36
1.74
33926--33976
2
27.5
2
78
21
58
45
0
1
52
1.12
33927--33972
10
4.8
9
89
7
65
43
0
2
54
1.12

Tables:   1

The End!