Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019769.1 Corchorus olitorius cultivar O-4 contig19802, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42786

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6713--6753
12
3.5
12
83
16
50
43
12
0
43
1.41
17812--17947
68
2.0
68
98
0
263
31
10
25
32
1.89
19208--19237
15
2.0
15
93
0
51
43
26
10
20
1.83
24587--24648
21
2.9
21
76
11
72
58
9
19
12
1.62
24861--24931
35
2.0
35
94
0
124
49
12
18
19
1.79
24912--24969
27
2.4
23
75
22
64
55
5
20
18
1.62
36233--36290
28
2.1
27
83
3
71
46
15
18
18
1.84
38605--38827
75
3.0
75
88
1
342
21
25
16
37
1.93

Tables:   1

The End!