Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019773.1 Corchorus olitorius cultivar O-4 contig19806, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67863

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9846--9903
24
2.4
24
82
5
73
48
8
5
37
1.56
9846--9903
12
4.8
13
79
12
61
48
8
5
37
1.56
10315--10368
28
1.9
28
84
0
72
40
16
18
24
1.90
18835--18863
1
29.0
1
100
0
58
0
0
0
100
0.00
25007--25041
15
2.3
15
100
0
70
48
14
11
25
1.77
32917--32950
6
5.5
6
96
3
59
82
0
2
14
0.79
32958--32995
3
12.7
3
100
0
76
68
31
0
0
0.90
32991--33019
15
1.9
15
100
0
58
68
6
0
24
1.13
32997--33027
12
2.6
12
94
0
53
64
6
0
29
1.18
37116--37278
53
3.1
53
97
0
308
24
7
17
49
1.73
39610--39638
14
2.1
14
100
0
58
20
6
6
65
1.40
40443--42481
736
2.8
730
86
3
2946
30
15
16
37
1.90
46203--46242
15
2.6
16
88
4
55
62
12
10
15
1.54
65096--65212
36
3.2
36
73
2
101
20
24
17
36
1.94

Tables:   1

The End!