Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019782.1 Corchorus olitorius cultivar O-4 contig19815, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16838

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4500--4533
17
2.1
17
88
5
52
52
2
0
44
1.16
8709--8871
84
1.9
84
85
4
222
32
19
3
45
1.65
12321--12421
51
2.0
51
82
7
125
21
19
13
44
1.86
15083--15249
87
1.9
87
83
2
219
31
8
22
37
1.84
15083--15269
87
2.1
87
81
1
205
30
9
24
36
1.86
15884--15922
15
2.6
15
88
8
53
2
5
25
66
1.25
16393--16432
18
2.2
18
100
0
80
50
20
0
30
1.49
16664--16730
31
2.2
30
89
5
100
49
10
17
22
1.77

Tables:   1

The End!