Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019799.1 Corchorus olitorius cultivar O-4 contig19832, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32115

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
662--687
13
2.0
13
100
0
52
38
0
15
46
1.46
3114--3166
25
2.1
25
92
0
88
33
20
3
41
1.70
14321--14347
2
13.5
2
100
0
54
48
0
0
51
1.00
15543--15583
18
2.4
17
88
8
64
17
7
12
63
1.50
15637--15729
41
2.3
41
94
0
159
45
17
0
37
1.49
21673--21735
29
2.2
29
97
2
119
34
9
28
26
1.88
22393--22440
23
2.1
23
96
0
87
39
27
6
27
1.80
23390--23427
9
4.3
9
90
3
60
47
0
18
34
1.49
24706--24846
49
2.9
47
79
11
160
27
16
5
50
1.67

Tables:   1

The End!