Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019801.1 Corchorus olitorius cultivar O-4 contig19834, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36443

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1430--1477
23
2.1
23
92
0
78
35
25
10
29
1.89
2208--2251
16
2.8
16
92
0
79
56
25
6
11
1.58
7570--7642
36
2.0
36
89
7
112
57
5
0
36
1.22
15588--15620
2
16.5
2
100
0
66
48
51
0
0
1.00
20097--20149
26
2.0
26
92
0
88
56
5
24
13
1.58
20994--21205
107
2.0
108
86
4
304
44
6
7
41
1.56
27347--27423
41
2.0
37
82
12
93
41
18
10
29
1.83
27526--27585
25
2.4
25
88
0
93
35
6
40
18
1.77
28667--28739
15
4.9
15
69
14
53
13
6
60
19
1.55
28667--28757
45
2.0
44
87
2
128
14
5
59
20
1.55
31462--31548
23
3.7
24
79
10
108
29
8
4
57
1.48
31461--31558
47
2.1
46
98
1
187
30
8
4
57
1.47
31485--31558
23
3.2
23
77
11
96
29
6
4
59
1.42

Tables:   1

The End!