Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019802.1 Corchorus olitorius cultivar O-4 contig19835, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8040

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
675--709
11
3.2
11
92
8
54
0
20
0
80
0.72
5118--5306
22
8.5
22
69
12
100
33
9
17
38
1.83
5119--5700
44
12.9
44
69
17
164
38
10
16
34
1.83
5115--5703
66
9.0
65
68
16
197
38
10
17
34
1.83
5311--6331
22
46.4
22
66
18
221
39
9
16
34
1.81
5530--5676
65
2.2
66
82
2
179
41
10
14
33
1.80
5536--5701
87
1.9
88
87
3
246
42
10
14
32
1.80
5802--6007
84
2.4
86
80
11
224
37
7
16
37
1.78
5928--6007
23
3.5
23
87
1
108
36
6
18
38
1.76

Tables:   1

The End!