Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019806.1 Corchorus olitorius cultivar O-4 contig19839, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8258

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
689--874
50
3.7
50
87
1
275
31
14
19
34
1.92
1451--1494
5
7.7
6
85
14
58
15
0
15
68
1.22
1452--1537
5
17.6
5
72
23
51
17
1
13
67
1.29
1451--1526
23
3.4
23
77
20
90
17
1
13
68
1.28
1458--1543
24
3.8
23
79
11
81
16
1
12
69
1.24

Tables:   1

The End!