Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019809.1 Corchorus olitorius cultivar O-4 contig19842, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2513

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--33
1
29.0
1
100
0
58
100
0
0
0
0.00
45--111
34
1.9
36
85
11
95
16
41
35
5
1.73
51--122
34
2.1
35
82
7
85
16
41
34
6
1.75
164--215
21
2.5
20
81
9
59
78
0
5
15
0.92
207--253
23
2.0
23
91
0
76
74
0
14
10
1.07

Tables:   1

The End!