Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019817.1 Corchorus olitorius cultivar O-4 contig19850, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28101

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5562--5592
14
2.2
14
100
0
62
45
0
12
41
1.42
15959--15983
11
2.3
11
100
0
50
32
20
24
24
1.98
18836--18902
33
2.0
33
88
5
100
28
11
10
49
1.73
21265--21291
6
4.5
6
100
0
54
29
18
0
51
1.46
21352--21796
137
3.2
136
83
7
503
44
14
19
22
1.86
21352--21796
70
6.5
70
79
10
452
44
14
19
22
1.86
22798--22837
18
2.2
18
86
4
53
45
5
20
30
1.72
26910--26947
9
4.3
9
90
3
60
47
0
18
34
1.49

Tables:   1

The End!