Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019818.1 Corchorus olitorius cultivar O-4 contig19851, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23009

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1070--1107
12
2.8
13
88
11
51
34
2
0
63
1.09
5911--7071
433
2.7
432
85
5
1472
30
15
12
41
1.84
8657--8697
21
2.0
20
95
4
73
19
2
19
58
1.50
9172--9250
39
2.0
39
95
0
140
45
13
10
30
1.77
10643--10720
26
3.2
26
63
26
69
52
15
10
21
1.72
10638--10743
48
2.2
47
90
5
176
55
16
9
18
1.67
21530--21565
19
1.9
18
88
5
54
41
8
22
27
1.82

Tables:   1

The End!