Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019825.1 Corchorus olitorius cultivar O-4 contig19858, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16113

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4031--4063
15
2.1
16
94
5
59
51
18
3
27
1.60
5362--5413
19
2.7
19
81
0
68
59
0
3
36
1.16
5456--5489
11
3.1
11
95
0
59
20
55
8
14
1.65
11886--11957
35
2.1
35
84
2
92
54
11
2
31
1.50
11989--12415
224
1.9
224
92
0
721
34
22
9
33
1.87
13171--13218
17
2.6
20
75
21
59
56
16
8
18
1.65
14595--15835
588
2.1
583
82
5
1496
37
14
14
32
1.88
16061--16091
2
15.5
2
100
0
62
51
48
0
0
1.00

Tables:   1

The End!