Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019827.1 Corchorus olitorius cultivar O-4 contig19860, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21333

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--25
1
25.0
1
100
0
50
100
0
0
0
0.00
429--482
27
2.0
27
88
0
81
40
16
14
27
1.88
6676--6718
16
2.6
16
81
7
50
39
4
11
44
1.62
6802--8008
438
2.8
438
91
2
1897
43
17
12
26
1.85
8216--8263
2
25.5
2
83
12
66
47
0
0
52
1.00
8216--8263
15
3.3
15
85
8
73
47
0
0
52
1.00
8199--8263
19
3.4
20
83
8
82
44
0
3
52
1.16
11481--11511
2
15.5
2
93
0
53
51
0
0
48
1.00
12402--12590
94
2.0
94
93
0
324
46
10
3
39
1.54
19612--19650
15
2.4
15
87
12
51
15
12
7
64
1.49

Tables:   1

The End!