Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019829.1 Corchorus olitorius cultivar O-4 contig19862, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26299

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
547--577
16
1.9
16
100
0
62
32
19
0
48
1.49
646--678
16
2.1
17
88
11
52
48
0
0
51
1.00
706--822
60
2.0
60
85
0
162
41
13
15
29
1.86
709--849
31
4.6
31
81
3
151
39
13
15
31
1.86
968--1034
31
2.2
31
92
5
111
20
17
11
49
1.79
18506--18573
21
3.0
22
70
23
61
58
1
1
38
1.16
21485--21514
1
30.0
1
100
0
60
0
0
0
100
0.00

Tables:   1

The End!