Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019832.1 Corchorus olitorius cultivar O-4 contig19865, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42901

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15412--15460
21
2.3
21
82
6
55
40
16
28
14
1.87
21298--21343
21
2.1
22
84
4
58
30
30
23
15
1.95
28052--28081
9
3.3
9
95
0
51
10
50
0
40
1.36
29776--29815
22
1.9
21
85
10
55
17
15
7
60
1.57
30196--30220
13
1.9
13
100
0
50
32
12
16
40
1.84
41313--41342
1
30.0
1
100
0
60
100
0
0
0
0.00
42690--42766
38
2.0
38
94
0
136
46
10
0
42
1.38

Tables:   1

The End!