Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019833.1 Corchorus olitorius cultivar O-4 contig19866, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29973

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10737--10774
20
1.9
20
100
0
76
47
21
0
31
1.51
12095--12472
123
3.0
123
94
3
639
50
1
10
37
1.47
13766--14029
131
2.0
132
89
5
410
50
1
10
37
1.47
14117--14144
11
2.5
11
100
0
56
46
0
17
35
1.49
14454--14480
2
13.5
2
100
0
54
48
0
0
51
1.00
15255--15331
29
2.6
30
77
10
77
31
24
11
32
1.91
15623--15698
29
2.6
30
82
4
100
30
11
27
30
1.92
19629--19744
57
2.0
57
96
0
214
33
24
1
40
1.65
19810--19890
42
1.9
42
94
0
144
30
7
14
46
1.72

Tables:   1

The End!