Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019834.1 Corchorus olitorius cultivar O-4 contig19867, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25228

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2638--2683
22
2.0
23
84
12
60
28
2
10
58
1.43
8387--8449
3
21.0
3
100
0
126
33
0
0
66
0.92
8753--9070
169
1.9
169
93
2
550
35
18
19
26
1.95
10300--10361
4
14.2
4
80
15
54
33
0
0
66
0.92
10300--10356
21
2.5
23
88
8
82
35
0
0
64
0.93
10300--10363
21
3.0
20
79
20
67
34
0
0
65
0.93
11939--12012
7
9.7
7
78
12
67
12
40
2
44
1.56
16886--16921
19
1.9
18
88
5
54
27
22
8
41
1.82
21082--21201
60
2.0
60
100
0
240
38
31
11
18
1.87
21172--21248
24
3.2
24
83
0
82
46
31
10
11
1.74
21180--21250
12
5.9
12
81
0
88
46
30
9
12
1.74
21172--21248
36
2.1
36
100
0
154
46
31
10
11
1.74

Tables:   1

The End!