Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019840.1 Corchorus olitorius cultivar O-4 contig19873, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21479

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
460--654
58
3.4
57
89
1
264
41
25
16
16
1.90
460--654
87
2.2
87
86
1
266
41
25
16
16
1.90
489--654
29
5.7
29
92
0
260
39
24
18
18
1.92
4781--5057
60
4.6
60
88
2
414
34
14
12
37
1.85
7412--7451
15
2.6
16
88
4
55
15
10
12
62
1.54
13341--13382
15
2.8
15
89
7
59
14
21
16
47
1.82
18998--19039
23
1.9
21
90
9
66
45
7
16
30
1.74

Tables:   1

The End!