Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019848.1 Corchorus olitorius cultivar O-4 contig19881, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12431

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2241--2291
23
2.2
23
85
0
66
29
3
13
52
1.58
2311--2448
7
19.7
7
91
0
123
31
5
17
45
1.70
2595--2673
33
2.4
33
91
0
122
31
6
17
44
1.74
2683--2818
55
2.5
56
80
10
140
33
20
16
29
1.95
2776--3033
54
4.8
52
83
7
304
35
21
15
28
1.93
2790--3034
107
2.3
106
87
2
346
35
21
15
28
1.93
3065--3106
18
2.3
18
83
0
57
52
9
14
23
1.71
3143--3338
37
5.3
37
74
8
146
45
13
14
27
1.82
3129--3362
74
3.1
74
81
5
267
44
12
15
27
1.82
4995--5059
14
4.8
13
85
12
78
36
10
9
43
1.72

Tables:   1

The End!