Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019856.1 Corchorus olitorius cultivar O-4 contig19889, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19510

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
346--395
25
2.0
25
96
3
93
38
26
16
20
1.92
1302--1358
30
1.9
29
89
10
89
21
14
5
59
1.54
2890--2925
19
1.9
19
88
5
56
44
8
19
27
1.79
4206--4248
22
2.0
22
81
9
52
16
11
9
62
1.53
13323--13544
32
6.9
32
90
0
336
22
15
24
37
1.93
13308--13566
64
4.0
63
78
8
211
22
17
24
35
1.95
15889--15982
27
3.5
27
92
1
136
24
18
40
17
1.91

Tables:   1

The End!