Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019858.1 Corchorus olitorius cultivar O-4 contig19891, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37149

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5790--6170
189
2.0
189
98
0
735
25
9
35
28
1.88
7192--7227
3
12.0
3
100
0
72
66
0
0
33
0.92
16158--16603
40
10.4
40
74
18
278
35
19
28
17
1.94
16221--16607
48
8.8
47
73
17
253
35
19
28
17
1.94
16178--16608
88
4.9
86
79
12
464
35
19
28
17
1.94
32346--32500
4
39.5
4
70
15
83
27
7
0
65
1.23
32347--32507
11
13.9
11
67
16
85
27
6
0
65
1.22
32337--32500
15
10.2
16
70
17
101
26
7
0
64
1.25
32336--32599
8
34.8
8
66
19
77
24
11
0
63
1.30
32348--32501
27
6.5
25
70
21
86
27
7
0
64
1.24
32348--32511
46
3.5
46
87
5
206
26
6
0
65
1.21
32520--32580
24
2.5
24
86
5
88
24
21
0
54
1.45
36286--36349
29
2.3
26
86
7
83
12
23
23
40
1.88

Tables:   1

The End!