Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01001986.1 Corchorus olitorius cultivar O-4 contig01986, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2595

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
798--835
15
2.7
14
88
8
51
21
0
7
71
1.11
822--868
24
2.0
24
95
0
85
34
0
14
51
1.43
825--876
24
2.2
24
85
0
68
32
0
17
50
1.47
1596--1645
24
2.2
23
92
7
84
34
0
16
50
1.45
1603--1653
24
2.2
23
85
3
66
33
0
17
49
1.47
1770--1799
6
4.8
6
95
4
51
50
0
13
36
1.42
1770--1803
12
2.8
13
86
13
54
50
0
11
38
1.39
2103--2159
19
3.0
19
80
10
80
40
12
5
42
1.65

Tables:   1

The End!