Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019867.1 Corchorus olitorius cultivar O-4 contig19900, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17894

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8157--8471
53
5.9
53
89
3
454
47
6
18
26
1.72
9658--9740
42
2.0
42
88
9
125
40
6
16
36
1.74
9647--10009
107
3.5
101
84
10
377
48
5
16
29
1.68
9697--10030
54
6.2
54
87
6
432
50
5
15
29
1.66
9697--10030
107
3.1
107
86
6
437
50
5
15
29
1.66
12620--12704
29
2.9
29
82
7
91
38
22
15
23
1.92
12623--12722
29
3.3
29
79
9
85
39
21
16
24
1.92
14412--14479
29
2.3
30
82
7
84
20
17
20
41
1.91

Tables:   1

The End!