Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019871.1 Corchorus olitorius cultivar O-4 contig19904, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30333

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
351--392
15
2.7
15
92
3
66
64
14
9
11
1.50
1980--2020
22
1.9
21
85
5
55
53
4
21
19
1.63
12180--12230
26
1.9
26
84
11
68
54
7
9
27
1.60
22123--22176
19
2.6
21
77
19
60
38
3
18
38
1.69
23682--23797
58
2.0
58
100
0
232
24
10
18
46
1.80

Tables:   1

The End!