Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019895.1 Corchorus olitorius cultivar O-4 contig19928, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5488

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37--85
15
2.9
17
82
14
57
51
2
4
42
1.32
56--279
115
1.9
115
90
3
353
48
4
10
37
1.57
146--407
144
1.8
142
91
3
436
48
5
8
37
1.58
826--889
32
2.0
32
90
0
101
39
6
4
50
1.49
1698--1742
20
2.2
20
92
0
72
26
13
20
40
1.89

Tables:   1

The End!