Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019900.1 Corchorus olitorius cultivar O-4 contig19933, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27965

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6237--6266
12
2.4
13
88
11
53
13
6
13
66
1.43
13090--13126
18
2.0
19
94
5
67
64
10
13
10
1.49
17989--18033
23
2.0
24
83
16
60
35
13
11
40
1.80
18043--18138
27
3.4
28
71
16
90
50
9
6
34
1.60
18059--18148
27
3.2
27
68
6
72
46
7
7
37
1.62
18056--18151
30
3.3
30
72
18
103
43
7
7
41
1.60
19831--19874
12
3.8
12
84
6
54
43
15
4
36
1.68
19831--19884
11
4.7
12
84
6
58
40
16
7
35
1.77
22506--22562
25
2.3
26
81
9
73
42
33
0
24
1.55
22562--22610
25
2.0
25
95
0
89
14
32
18
34
1.91
27029--27065
10
3.5
11
85
10
51
10
56
32
0
1.34
27030--27065
16
2.3
15
90
4
54
8
58
33
0
1.28

Tables:   1

The End!