Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019905.1 Corchorus olitorius cultivar O-4 contig19938, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10511

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
663--703
20
2.0
20
100
0
82
46
19
24
9
1.80
1096--1169
27
2.7
28
82
2
96
39
24
16
20
1.92
1638--1718
26
3.1
26
83
1
108
41
19
17
20
1.90
6080--6111
11
2.9
11
95
0
55
9
21
12
56
1.64
7142--7183
15
2.8
15
82
7
50
61
7
4
26
1.42

Tables:   1

The End!